Bhargava Morampalli
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Notes on bioinformatics, genomics, and computation written for the version of me who was starting out.
python-for-biology.part2
Python Bioinformatics

Python for Biological Data Analysis, Part 2: Working with Files

How to read, write, and append biological sequence files in Python using safe file I/O patterns.

3 April 2019
3 min read
python-for-biology.part1
Python Bioinformatics

Python for Biological Data Analysis, Part 1: Strings and Sequence Basics

A practical introduction to Python string operations for biological sequence analysis.

2 April 2019
3 min read
samtools-reads.sh
Bioinformatics Command Line

Extracting Mapped and Unmapped Reads from FASTQ

A practical command-line workflow to separate mapped and unmapped reads and recover them into FASTQ files.

4 March 2019
3 min read
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