Bhargava Morampalli
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Browse posts on bioinformatics, Python, sequencing, command-line workflows, and related topics.
Bioinformatics
3 posts
Latest post
Python for Biological Data Analysis, Part 2: Working with Files
3 April 2019
How to read, write, and append biological sequence files in Python using safe file I/O patterns.
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Python
2 posts
Latest post
Python for Biological Data Analysis, Part 2: Working with Files
3 April 2019
How to read, write, and append biological sequence files in Python using safe file I/O patterns.
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Command Line
1 post
Latest post
Extracting Mapped and Unmapped Reads from FASTQ
4 March 2019
A practical command-line workflow to separate mapped and unmapped reads and recover them into FASTQ files.
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File I/O
1 post
Latest post
Python for Biological Data Analysis, Part 2: Working with Files
3 April 2019
How to read, write, and append biological sequence files in Python using safe file I/O patterns.
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Foundations
1 post
Latest post
Python for Biological Data Analysis, Part 1: Strings and Sequence Basics
2 April 2019
A practical introduction to Python string operations for biological sequence analysis.
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Sequencing
1 post
Latest post
Extracting Mapped and Unmapped Reads from FASTQ
4 March 2019
A practical command-line workflow to separate mapped and unmapped reads and recover them into FASTQ files.
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