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A topical index of posts on bioinformatics, Python, sequencing, command-line workflows, and related notes.
Latest post
11 June 2026
A practical guide to writing local Nextflow modules with modern nf-core-style metadata, topic-channel version outputs, stub tests, and nf-test snapshots.
Latest post
3 April 2019
How to read, write, and append biological sequence files in Python using safe file I/O patterns.
Latest post
4 March 2019
A practical command-line workflow to separate mapped and unmapped reads and recover them into FASTQ files.
Latest post
26 July 2026
How I worked through a Docker-based Hermes Agent setup on a remote Ubuntu server, connected my ChatGPT and Grok subscriptions, setup Telegram as agent interface, and gave the agent a sandboxed workspace.
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